Atelier 286 - Impact des approches spatiales multi-omiques pour la recherche fondamentale et clinique
The INSERM workshop 286 will highlight 4 main themes/sessions through various presentations. These themes will be address alternatively each day to highlight the complementarity of spatial multiOMICs approaches.
| SESSION 1 : Overview of spatial transcriptomics and proteomics and the future challenges of these technologies | |
| SESSION 2 : Spatial proteomic and proteogenomics, new tools to discover the hidden dimensions of biology | |
| SESSION 3: A deep diving into the potential of spatial transcriptomic tools for your research projects | |
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SESSION 4 : Integrating spatial multi Omics data with bioinformatic and machine learning algorithms |
Mercredi 19 Novembre 2025 / Wednesday, November 19th, 2025 |
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| 15:30 - 16:00 | Reception of participants |
| 16:00 - 16:15 | Welcome and presentation by the organizers |
| 16:15 - 17:00 | Introduction to spatial proteomics guided by mass spectrometry imaging and its applications in clinical research |
| Isabelle Fournier (PRISM U1192, Lille, France) | |
| 17:00 - 17:30 | Coffee break |
| 17:30 - 18:15 | Overview of spatial transcriptomic technologies and their applications |
| TO BE CONFIRM | |
| 18:15 - 19:00 | Single cell proteomics |
| Karl Mechtler (Research Institute of Molecular Pathology, Austria) | |
| 19:30 | Dinner |
Jeudi 20 Novembre 2025 / Thursday, November 20th, 2025 |
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| 06:30 - 08:30 | Breakfast |
| 08:30 - 09:15 | Spatial omics guided by Mass spectrometry associated to patient survival in glioblastoma |
| Michel Salzet (PRISM U1192, Lille, France) | |
| 09:15 - 10:00 | OpenProt: deeper functional annotation of the coding potential of eukaryotic genomes |
| Xavier Roucou (Université de Sherbrooke, Canada) | |
| 10:00 - 10:30 | Coffee break |
| 10:30 - 11:15 | Application of spatial omics to reveal cells interaction and organization across multiple dimensions to accelerate discovery and advance cures. |
| Jasmine Plummer (Saint Jude Children's Research Hospital, Memphis, USA) | |
| 11:15 - 12:00 | TO BE CONFIRM |
| TO BE CONFIRM | |
| 12:00 - 14:00 | Lunch |
| 14:00 - 14:45 | Integrative Riboseq analyses for proteogenomic in type 2 diabetes and related diseases |
| Amélie Bonnefond (EGID, Lille, France) | |
| 14:45 - 15:30 | Machine learning for the integration of omics |
| Arnaud Droit (Université de Laval, Canada) | |
| 15:30 - 16:00 | Coffee Break |
| 16:00 - 16:45 | Comparison of spatial transcriptomics technologies to better define tissue organization |
| Luciano Martelotto (SAiGENCI, Adelaide, Australia) | |
| 16:45 - 17:30 | Combining spatial transcriptomic and proteomic to understand pancreatic oncogenesis |
| Remy Nicolle (CRI, Paris, France) | |
| 17:30 - 18:30 | Round Table: Worldwide initiative to overcome spatial technologies new challenges |
| 19:30 - 20:15 | Cocktail |
| 20:15 | Dinner |
Vendredi 21 Novembre 2025 / Friday, November 21st, 2025 |
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| 06:30 - 08:30 | Breakfast |
| 08:30 - 09:15 | Proteogenomic to discover alternative proteins |
| Sarah Slavoff (Yale University, USA) | |
| 09:15 - 10:00 | Integrating spatial omics |
| Lennart Martens (Ghent University, Belgium) | |
| 10:00 - 10:30 | Coffee Break |
| 10:30 - 11:15 | Spatial single cell transcriptomics atlas of the human respiratory tract |
| Pascal Barbry (IPMC, Nice, France) | |
| 11:15 - 12:00 | Spatial transcriptomic applied to non-model organism |
| Marco Grillo (SciLife Lab, Stockholm, Sweden) | |
| 12:00 - 12:30 | Open discussion: Future of these technologies? |
| 12:30 - 14:00 | Lunch |
| 14:00 | Departure |