Inserm Workshops 2026 - INSERM

Inserm Workshops 2026

Workshop 291 - Multiparametric Cytometry Data Analysis: Stairway to High-Content

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 Lundi 5 octobre 2026 ◘ Monday, October 5th, 2026 

14:30 - 15:00  Reception of participants 
15:00 - 15:15  Welcome and presentation by the organizers 
SESSION I  Cytometry data pre-processing 
15:15 - 16:00  Selection of high-quality cytometry data 
Annelies Emmaneel (VIB, Ghent, Belgium) 
16:00 - 16:30  Coffee Break & Posters Session 
16:30 - 17:15  Normalization, transformation and scaling of cytometry data 
Raphael Gottardo (University of Lausanne, Switzerland) 
17:15 - 18:00  Experimental design, quality controls and batch correction 
Sofie van Gassen (VIB, Ghent, Belgium) 
18:00 - 19:00  Panel discussion 
19:00 - 19:15  Posters Presentation 
19:15 Cocktail Dinner & Posters Session 
 Mardi 6 octobre 2026 ◘ Tuesday, October 6th, 2026 
06:30 - 08:30  Breakfast 
SESSION II  Cytometry data unsupervised analysis 
08:30 - 09:15  Dimension Reduction: how to use it properly. 
Anna Belkina (Boston University, USA) 
09:15 - 10:00  Clustering: use, limits and control. 
Yvan Saeys (VIB, Ghent, Belgium) 
10:00 - 10:30  Coffee Break & Posters Session 
10:30 - 11:15  Clustering & Dimension Reduction: making most of them. 
Jonathan Irish (Vanderbilt University, Nashville, USA) 
11:15 - 12:00  Panel discussion 
12:00 - 13:00  Lunch 
SESSION III  Automated gating and machine learning 
13:00 - 13:45  StarGate, rigorous repetitive analyses with standardized gating strategies 
Martin Mestdagh (Institut Curie, Paris, France) 
13:45 - 14:30  Cytolytic: One stream automatic solution for your analysis 
Can Pinar (Cytolytics, Berlin Germany) 
Benjamin Tast (LMU-BMC, Munich, Germany) 
14:30 - 15:15  METAFlow: Augmented intelligence-driven analysis solution 
Vincent Petit (METAFlow, Paris, France) 
Mar Naranjo-Gomez (IRMB INSERM, Montpellier, France) 
15:15 - 16:00  TerraFlow: Supervised analysis from the FCS to the scientific report 
Arielle Ginsberg (TerraFlow, New York, USA) 
Sonia Gavasso (University of Bergen, Norway) 
16:00 - 16:45  Round Table 
16:45 - 17:15  Coffee Break & Posters Session 
SESSION IV  Cell annotation 
17:15 - 17:30  Introduction to cell annotation 
Alexia Alfaro (Institut Gustave Roussy, Paris, France) 
17:30 - 18:15  Global Standardization of Immune Cell Population Identification and Semantic Annotation 
Ryan Brinkman (BC Cancer Agency, Vancouver, Canada) 
18:15 - 19:00  Global Standardization by arithmetization 
Antonio Cosma (Luxembourg Institute of Health, Esch-sur-Alzette, Luxembourg) 
19:00 - 19:30  Panel discussion 
20:15 Dinner 

Mercredi 7 octobre 2026 ◘ Wednesday, October 7th, 2026 

06:30 - 08:30  Breakfast 
SESSION V  Biological and clinical cytometry data integration 
08:30 - 09:15  Cytometry / Omics / Clinics: how to perform integration? 
Sarah Bonte (VIB, Ghent, Belgium) 
09:15 - 10:00  Application of cytometry data integration in multiomics analysis 
Thomas Ashhurst (University of Sydney, Australia) 
10:00 - 10:30  Coffee Break & Posters Session 
10:30 - 11:15  Machine learning for integrating clinical and biological data 
Samuel Granjeaud (CRCM, Marseille, France) 
11:15 - 12:00  Panel discussion 
12:00 - 14:00  Lunch 
14:00 Departure 

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